Lecture Slides

Lectures from SYSTEMS BIOLOGY: Simulation of Dynamic Network States

Chapter 1: Introduction

Chapter 2: Basic Concepts

PART I: Simulation of Dynamic States

Chapter 3: Dynamic Simulation

Chapter 4: Chemical Reactions

Chapter 5: Enzyme Kinetics

Chapter 6: Open Systems

PART II: Biological Characteristics

Chapter 7: Orders of Magnitude

Chapter 8: Stoichiometric Structure

Chapter 9: Regulation as Elementary Phenomena

PART III: Metabolism

Chapter 10: Glycolysis

Chapter 11: Coupling Pathways

Chapter 12: Building Networks

PART IV: Simulation of Macromolecular Systems

Chapter 13: Hemoglobin

Chapter 14: Regulatory Pathways



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