H pylori

We have the following information available:

H. pylori iIT341 GSM/GPR

Thiele, I., Vo, T.D., Price, N.D. and Palsson, B.Ø., "An Expanded Metabolic Reconstruction of Helicobacter pylori (iIT341 GSM/GPR): An in silico genome-scale characterization of single and double deletion mutants", Journal of Bacteriology, 187(16): pp. 5818-5830 (2005).

Microsoft Excel format of iIT341 GSM/GPR Complete list of network reactions, metabolites, and exchange fluxes

SBML version of iIT341 GSM/GPR

Model of iIT341 GSM/GPR - minimal medium I, Matlab format

H. pylori iCS291

Schilling, C. H., Covert, M.W., Famili, I., Church, G.M., Edwards, J.S., and Palsson, B.Ø., "Genome-scale metabolic model of Helicobacter pylori 26695", Journal of Bacteriology, 184(16): pp. 4582-4593 (2002).

Model in Microsoft Excel format

H pylori Others

If you have further questions about a "computational" modeling of H. pylori, please email us at ines-thiele@gmx.de.

Location

Location

417 Powell-Focht Bioengineering Hall

9500 Gilman Drive La Jolla, CA 92093-0412

Contact Us

Contact Us

In Silico Lab:  858-822-1144

Wet Lab:  858-246-1625

FAX:   858-822-3120

Website Concerns: sbrgit@ucsd.edu

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